Cylinder cracks can be caused by a multitude of things. The most common is probably age and re-use of cylinders. Things can only be heated up and cooled down so-many times before the elasticity of the materials give up the ghost.
The most common areas of cracks are in the exhaust -port areas, due to the temperature extremes and resultant erosion that take place there. Many times a cylinder shop may offer to weld-up these cracks in an effort to return them to service, and it works for awhile, but it's only a matter of time before the failure occurs again. Whenever you can afford it, I believe it's best to use new cylinder assy's for replacements.
Another consideration is the dissimilar materials at the conjunction of the steel barrel and aluminum head of these cylinders. The steel barrel has male threads upon which the female-threaded head is screwed onto. Aluminum and steel not only disagree with each other from an electrolytic-corrosion standpoint but also as a feature of dissimilar expansion/contraction rates. It's only a matter of time before a leak or a crack occurs at that joint. (I had a head completely blow off the cylinder during take-off/initial-climb in my C-206. On another airplane (Baron) during an inspection, we noted a cylinder which held 70/80 compression, but heard a slight hissing. When we painted the cylinder with soapy water, the cylinder head-to-barrel joint foamed up quite nicely! It was a good catch! I initially thought the hissing noise was simply the compressed air being used to feed the compression-test.... and so now you have a good method to inspect cylinders, don't you... Paint them with soapy water during compression tests.)
Ordinarily, the only real method to check them is removal and dye-penetrant checks. Sometimes those cracks are very difficult to detect except by that method.
It's widely-believed that cracking is encouraged by large power changes made of short periods of time, and by "super cooling" caused by high-speed, low-power descents. I'm not personally convinced of it being any more so than by the application of takeoff power at initial takeoff, however. But it never hurts to be gentle with your engine's power changes and attempt to keep operating temperature/pressure changes from making wild excursions unnecessarily. (And it's good technique at any rate.)
